Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rfx5Q9JL61 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Gm11355-201ENSMUST00000121120 306 ntBASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rfx5Q9JL61 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rfx5Q9JL61 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Rfx5Q9JL61 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rfx5Q9JL61 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Rfx5Q9JL61 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.77■□□□□ 0.43
Rfx5Q9JL61 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rfx5Q9JL61 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
Rfx5Q9JL61 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Gm6345-202ENSMUST00000180900 204 ntBASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Gm5587-201ENSMUST00000206270 674 ntBASIC17.76■□□□□ 0.43
Rfx5Q9JL61 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Rfx5Q9JL61 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms