Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scn5aQ9JJV9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.37■□□□□ 0.37
Scn5aQ9JJV9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Gm12350-201ENSMUST00000121208 462 ntBASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Gm25745-201ENSMUST00000174945 133 ntBASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Scn5aQ9JJV9 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Gm1401-201ENSMUST00000122048 772 ntBASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Scn5aQ9JJV9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Gm5364-201ENSMUST00000216789 889 ntBASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.34■□□□□ 0.37
Scn5aQ9JJV9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Gm11594-201ENSMUST00000122313 162 ntBASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Gm37935-201ENSMUST00000192012 982 ntBASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Scn5aQ9JJV9 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms