Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rhox4bQ9JI43 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rhox4bQ9JI43 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.69□□□□□ -0.22
Rhox4bQ9JI43 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.68□□□□□ -0.22
Rhox4bQ9JI43 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rhox4bQ9JI43 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Gm13216-201ENSMUST00000117145 591 ntBASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rhox4bQ9JI43 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rhox4bQ9JI43 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms