Protein–RNA interactions for Protein: Q9ESC8

Aff4, AF4/FMR2 family member 4, mousemouse

Predictions only

Length 1,160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aff4Q9ESC8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Aff4Q9ESC8 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Aff4Q9ESC8 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Aff4Q9ESC8 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Aff4Q9ESC8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Gm10252-201ENSMUST00000209541 832 ntBASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Gm30025-201ENSMUST00000218555 728 ntBASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Aff4Q9ESC8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Aff4Q9ESC8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Aff4Q9ESC8 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.77■□□□□ 0.27
Aff4Q9ESC8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Gm27463-201ENSMUST00000183569 57 ntBASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Mir6982-201ENSMUST00000184354 68 ntBASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.76■□□□□ 0.27
Aff4Q9ESC8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Gm18958-201ENSMUST00000174258 762 ntBASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Aff4Q9ESC8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Aff4Q9ESC8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Aff4Q9ESC8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Aff4Q9ESC8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms