Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tlr9Q9EQU3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Gm30025-201ENSMUST00000218555 728 ntBASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tlr9Q9EQU3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tlr9Q9EQU3 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.71■□□□□ 0.42
Tlr9Q9EQU3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tlr9Q9EQU3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Gm10819-201ENSMUST00000099988 561 ntBASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.7■□□□□ 0.42
Tlr9Q9EQU3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Gm3375-201ENSMUST00000203929 796 ntBASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tlr9Q9EQU3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Gm6433-201ENSMUST00000118634 875 ntBASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Gm11539-201ENSMUST00000119837 557 ntBASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Gm13436-201ENSMUST00000120418 567 ntBASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Gm10231-201ENSMUST00000181584 441 ntBASIC17.68■□□□□ 0.42
Tlr9Q9EQU3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms