Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nkx2-4Q9EQM3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Gm25990-201ENSMUST00000102440 86 ntBASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Gm13418-201ENSMUST00000119097 944 ntBASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nkx2-4Q9EQM3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Gm7230-201ENSMUST00000173026 815 ntBASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Nkx2-4Q9EQM3 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-4Q9EQM3 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Nkx2-4Q9EQM3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-4Q9EQM3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-4Q9EQM3 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Nkx2-4Q9EQM3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Nkx2-4Q9EQM3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-4Q9EQM3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Nkx2-4Q9EQM3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms