Protein–RNA interactions for Protein: Q9DCF9

Ssr3, Translocon-associated protein subunit gamma, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3Q9DCF9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ssr3Q9DCF9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ssr3Q9DCF9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ssr3Q9DCF9 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Gm6139-201ENSMUST00000079261 882 ntBASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Gm13241-201ENSMUST00000094493 780 ntBASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Gm37820-201ENSMUST00000194021 2147 ntBASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Ssr3Q9DCF9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms