Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
3830403N18RikQ9D6C3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
3830403N18RikQ9D6C3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.83■□□□□ 0.44
3830403N18RikQ9D6C3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
3830403N18RikQ9D6C3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
3830403N18RikQ9D6C3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
3830403N18RikQ9D6C3 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Gm17661-201ENSMUST00000170317 270 ntBASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
3830403N18RikQ9D6C3 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
3830403N18RikQ9D6C3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
3830403N18RikQ9D6C3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
3830403N18RikQ9D6C3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms