Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Taf1dQ9D4V4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 AC159114.1-201ENSMUST00000220349 266 ntBASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Taf1dQ9D4V4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Taf1dQ9D4V4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Taf1dQ9D4V4 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Gm14701-201ENSMUST00000117156 348 ntBASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Taf1dQ9D4V4 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Gm27321-201ENSMUST00000185021 205 ntBASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Taf1dQ9D4V4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Gm44872-201ENSMUST00000207864 420 ntBASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.12■□□□□ 0.81
Taf1dQ9D4V4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms