Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trim42Q9D2H5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.86■□□□□ 0.29
Trim42Q9D2H5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trim42Q9D2H5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trim42Q9D2H5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Mir2861-201ENSMUST00000175539 82 ntBASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Flg-201ENSMUST00000050758 1488 ntBASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim42Q9D2H5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim42Q9D2H5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim42Q9D2H5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim42Q9D2H5 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim42Q9D2H5 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.82■□□□□ 0.28
Trim42Q9D2H5 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms