Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Gm13401-201ENSMUST00000117074 291 ntBASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sft2d3Q9CSV6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.35□□□□□ -0.11
Sft2d3Q9CSV6 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Gm18959-201ENSMUST00000208954 655 ntBASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sft2d3Q9CSV6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sft2d3Q9CSV6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sft2d3Q9CSV6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Sft2d3Q9CSV6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sft2d3Q9CSV6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms