Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.74■□□□□ 0.27
Lrrc40Q9CRC8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gm22240-201ENSMUST00000175225 82 ntBASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gm3375-201ENSMUST00000203929 796 ntBASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gm10812-201ENSMUST00000099864 546 ntBASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lrrc40Q9CRC8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Lrrc40Q9CRC8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Gm21814-202ENSMUST00000203277 873 ntBASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Lrrc40Q9CRC8 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.71■□□□□ 0.26
Lrrc40Q9CRC8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lrrc40Q9CRC8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Lrrc40Q9CRC8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Lrrc40Q9CRC8 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.69■□□□□ 0.26
Lrrc40Q9CRC8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms