Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cldnd1Q9CQX5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Gm12260-201ENSMUST00000122447 411 ntBASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Psmb5-202ENSMUST00000227257 622 ntBASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cldnd1Q9CQX5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cldnd1Q9CQX5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Gm44430-201ENSMUST00000203376 995 ntBASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cldnd1Q9CQX5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Gm2756-201ENSMUST00000195851 400 ntBASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cldnd1Q9CQX5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cldnd1Q9CQX5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms