Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm14464-201ENSMUST00000119658 1254 ntBASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Mir3081-201ENSMUST00000175305 84 ntBASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 AC154471.1-201ENSMUST00000224418 436 ntBASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Sec61bQ9CQS8 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Mir8112-201ENSMUST00000184382 131 ntBASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gm37722-201ENSMUST00000193757 208 ntBASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gm25007-201ENSMUST00000083808 133 ntBASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Actl10-202ENSMUST00000226583 1501 ntBASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Gm19721-201ENSMUST00000195284 1764 ntBASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Sec61bQ9CQS8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Gm17971-201ENSMUST00000190239 806 ntBASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Gm43231-201ENSMUST00000202960 2258 ntBASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Sec61bQ9CQS8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61bQ9CQS8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61bQ9CQS8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Sec61bQ9CQS8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61bQ9CQS8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Sec61bQ9CQS8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms