Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Gm17808-201ENSMUST00000200859 894 ntBASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Lsm7Q9CQQ8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Gm6623-201ENSMUST00000173570 544 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Lsm7Q9CQQ8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Gm11950-201ENSMUST00000121615 838 ntBASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Lsm7Q9CQQ8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Lsm7Q9CQQ8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsm7Q9CQQ8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Lsm7Q9CQQ8 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Gm10819-201ENSMUST00000099988 561 ntBASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Lsm7Q9CQQ8 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms