Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trim33Q99PP7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Gm7791-201ENSMUST00000219066 539 ntBASIC16.71■□□□□ 0.27
Trim33Q99PP7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim33Q99PP7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trim33Q99PP7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm15565-201ENSMUST00000118890 427 ntBASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm27463-201ENSMUST00000183569 57 ntBASIC16.7■□□□□ 0.26
Trim33Q99PP7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC16.7■□□□□ 0.26
Trim33Q99PP7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.7■□□□□ 0.26
Trim33Q99PP7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim33Q99PP7 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Il3ra-202ENSMUST00000223589 738 ntBASIC16.69■□□□□ 0.26
Trim33Q99PP7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim33Q99PP7 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.68■□□□□ 0.26
Trim33Q99PP7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim33Q99PP7 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.67■□□□□ 0.26
Trim33Q99PP7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim33Q99PP7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.67■□□□□ 0.26
Trim33Q99PP7 Gm11539-201ENSMUST00000119837 557 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms