Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trem2Q99NH8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trem2Q99NH8 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.15■□□□□ 0.34
Trem2Q99NH8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trem2Q99NH8 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.14■□□□□ 0.33
Trem2Q99NH8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.14■□□□□ 0.33
Trem2Q99NH8 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trem2Q99NH8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.13■□□□□ 0.33
Trem2Q99NH8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.13■□□□□ 0.33
Trem2Q99NH8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.13■□□□□ 0.33
Trem2Q99NH8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trem2Q99NH8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.12■□□□□ 0.33
Trem2Q99NH8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trem2Q99NH8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trem2Q99NH8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trem2Q99NH8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms