Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rnf111Q99ML9 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf111Q99ML9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf111Q99ML9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf111Q99ML9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Gm10517-202ENSMUST00000192970 758 ntBASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf111Q99ML9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf111Q99ML9 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms