Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Tlr3Q99MB1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.1■□□□□ 0.49
Tlr3Q99MB1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Tlr3Q99MB1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Tlr3Q99MB1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tlr3Q99MB1 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.08■□□□□ 0.49
Tlr3Q99MB1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Tlr3Q99MB1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Gm6659-201ENSMUST00000174752 547 ntBASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Tlr3Q99MB1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Tlr3Q99MB1 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Gm10819-201ENSMUST00000099988 561 ntBASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Tlr3Q99MB1 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Tlr3Q99MB1 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms