Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cdca3Q99M54 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cdca3Q99M54 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.66■□□□□ 0.1
Cdca3Q99M54 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cdca3Q99M54 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Gm12085-201ENSMUST00000119263 940 ntBASIC15.65■□□□□ 0.1
Cdca3Q99M54 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.65■□□□□ 0.1
Cdca3Q99M54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cdca3Q99M54 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
Cdca3Q99M54 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.64■□□□□ 0.09
Cdca3Q99M54 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.64■□□□□ 0.09
Cdca3Q99M54 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.64■□□□□ 0.09
Cdca3Q99M54 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cdca3Q99M54 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.64■□□□□ 0.09
Cdca3Q99M54 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Gm2274-201ENSMUST00000184539 609 ntBASIC15.63■□□□□ 0.09
Cdca3Q99M54 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.63■□□□□ 0.09
Cdca3Q99M54 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cdca3Q99M54 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cdca3Q99M54 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cdca3Q99M54 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms