Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
Clcc1Q99LI2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Clcc1Q99LI2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clcc1Q99LI2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Clcc1Q99LI2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Clcc1Q99LI2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clcc1Q99LI2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Clcc1Q99LI2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clcc1Q99LI2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clcc1Q99LI2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Gm6623-201ENSMUST00000173570 544 ntBASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Gm37722-201ENSMUST00000193757 208 ntBASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clcc1Q99LI2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms