Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Gm45328-201ENSMUST00000210942 917 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Gm10819-201ENSMUST00000099988 561 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TrabdQ99JY4 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TrabdQ99JY4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.55■□□□□ 0.4
TrabdQ99JY4 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.54■□□□□ 0.4
TrabdQ99JY4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TrabdQ99JY4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TrabdQ99JY4 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.52■□□□□ 0.4
TrabdQ99JY4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TrabdQ99JY4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.52■□□□□ 0.39
TrabdQ99JY4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TrabdQ99JY4 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TrabdQ99JY4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Phf7-203ENSMUST00000226565 1971 ntBASIC17.5■□□□□ 0.39
TrabdQ99JY4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.5■□□□□ 0.39
TrabdQ99JY4 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.5■□□□□ 0.39
TrabdQ99JY4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TrabdQ99JY4 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TrabdQ99JY4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TrabdQ99JY4 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TrabdQ99JY4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms