Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Gm35638-201ENSMUST00000220724 652 ntBASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdhb20Q91XZ9 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Pcdhb20Q91XZ9 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.26■□□□□ 0.19
Pcdhb20Q91XZ9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Gm38216-201ENSMUST00000194872 1214 ntBASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdhb20Q91XZ9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm25016-201ENSMUST00000158399 131 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pcdhb20Q91XZ9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pcdhb20Q91XZ9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms