Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Phf7-203ENSMUST00000226565 1971 ntBASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb22Q91XZ8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Gm18115-201ENSMUST00000221209 621 ntBASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pcdhb22Q91XZ8 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.66■□□□□ 0.74
Pcdhb22Q91XZ8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Gm13836-201ENSMUST00000121159 501 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Gm27389-201ENSMUST00000183622 195 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Gm21559-201ENSMUST00000220638 855 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Gm8587-201ENSMUST00000076538 843 ntBASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb22Q91XZ8 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdhb22Q91XZ8 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Gm10013-201ENSMUST00000106074 672 ntBASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb22Q91XZ8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdhb22Q91XZ8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms