Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Pcdhb3Q91XZ7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Pcdhb3Q91XZ7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Gm13168-201ENSMUST00000121771 632 ntBASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Trmt13-210ENSMUST00000198454 880 ntBASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdhb3Q91XZ7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdhb3Q91XZ7 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb3Q91XZ7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb3Q91XZ7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdhb3Q91XZ7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdhb3Q91XZ7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdhb3Q91XZ7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms