Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb6Q91XZ4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhb6Q91XZ4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhb6Q91XZ4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Gm2274-201ENSMUST00000184539 609 ntBASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Gm10252-201ENSMUST00000209541 832 ntBASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhb6Q91XZ4 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gm13186-201ENSMUST00000118031 316 ntBASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gm16061-201ENSMUST00000122167 857 ntBASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhb6Q91XZ4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Pcdhb6Q91XZ4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.27■□□□□ 0.35
Pcdhb6Q91XZ4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Pcdhb6Q91XZ4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms