Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Gm10013-201ENSMUST00000106074 672 ntBASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Gm21362-201ENSMUST00000194272 928 ntBASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhga9Q91XX9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Mir5130-201ENSMUST00000175160 84 ntBASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhga9Q91XX9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Gm18032-201ENSMUST00000222541 538 ntBASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhga9Q91XX9 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Gm23634-201ENSMUST00000175071 91 ntBASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Gm7367-201ENSMUST00000057611 492 ntBASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.66■□□□□ 0.26
Pcdhga9Q91XX9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhga9Q91XX9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms