Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.29■□□□□ 0.68
Trex1Q91XB0 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.29■□□□□ 0.68
Trex1Q91XB0 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trex1Q91XB0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.28■□□□□ 0.68
Trex1Q91XB0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm28659-201ENSMUST00000188013 759 ntBASIC19.28■□□□□ 0.68
Trex1Q91XB0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gm5864-201ENSMUST00000202263 970 ntBASIC19.28■□□□□ 0.68
Trex1Q91XB0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.28■□□□□ 0.68
Trex1Q91XB0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.28■□□□□ 0.68
Trex1Q91XB0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.27■□□□□ 0.68
Trex1Q91XB0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trex1Q91XB0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trex1Q91XB0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Trex1Q91XB0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trex1Q91XB0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trex1Q91XB0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.26■□□□□ 0.67
Trex1Q91XB0 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Gm15372-201ENSMUST00000120729 834 ntBASIC19.25■□□□□ 0.67
Trex1Q91XB0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.25■□□□□ 0.67
Trex1Q91XB0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.25■□□□□ 0.67
Trex1Q91XB0 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.25■□□□□ 0.67
Trex1Q91XB0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms