Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb17Q91VD8 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Actl10-202ENSMUST00000226583 1501 ntBASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb17Q91VD8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Gm43275-201ENSMUST00000202053 1020 ntBASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb17Q91VD8 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Pcdhb17Q91VD8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb17Q91VD8 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb17Q91VD8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb17Q91VD8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms