Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Gm44450-201ENSMUST00000199528 114 ntBASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Lmcd1Q8VEE1 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Gm6089-201ENSMUST00000197666 938 ntBASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 AV026068-213ENSMUST00000223675 1171 ntBASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Lmcd1Q8VEE1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gm4535-201ENSMUST00000182274 558 ntBASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gm10355-201ENSMUST00000097146 517 ntBASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Lmcd1Q8VEE1 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Lmcd1Q8VEE1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Lmcd1Q8VEE1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms