Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lsm1Q8VC85 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Gm12085-201ENSMUST00000119263 940 ntBASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lsm1Q8VC85 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lsm1Q8VC85 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Gm7638-201ENSMUST00000121348 967 ntBASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Gm38027-201ENSMUST00000192315 235 ntBASIC16.14■□□□□ 0.17
Lsm1Q8VC85 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lsm1Q8VC85 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Gm10653-202ENSMUST00000139570 835 ntBASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lsm1Q8VC85 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lsm1Q8VC85 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms