Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Gm43173-201ENSMUST00000202246 593 ntBASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Gm45417-201ENSMUST00000209533 758 ntBASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Serp2-204ENSMUST00000228055 705 ntBASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Gm6139-201ENSMUST00000079261 882 ntBASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc9Q8VC31 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Ccdc9Q8VC31 AC154412.1-201ENSMUST00000226540 2786 ntBASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc9Q8VC31 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Smad6-203ENSMUST00000179458 273 ntBASIC20.33■□□□□ 0.85
Ccdc9Q8VC31 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc9Q8VC31 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc9Q8VC31 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc9Q8VC31 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc9Q8VC31 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc9Q8VC31 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms