Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC20.17■□□□□ 0.82
Top1mtQ8R4U6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Gm8839-201ENSMUST00000121279 1645 ntBASIC20.16■□□□□ 0.82
Top1mtQ8R4U6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Gm11539-201ENSMUST00000119837 557 ntBASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Gm13436-201ENSMUST00000120418 567 ntBASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Top1mtQ8R4U6 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.14■□□□□ 0.82
Top1mtQ8R4U6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Top1mtQ8R4U6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.13■□□□□ 0.81
Top1mtQ8R4U6 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Gm10252-201ENSMUST00000209541 832 ntBASIC20.12■□□□□ 0.81
Top1mtQ8R4U6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms