Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gtf3c5Q8R2T8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Gm18959-201ENSMUST00000208954 655 ntBASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 Gm5898-201ENSMUST00000121016 2071 ntBASIC19.74■□□□□ 0.75
Gtf3c5Q8R2T8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf3c5Q8R2T8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf3c5Q8R2T8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf3c5Q8R2T8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf3c5Q8R2T8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms