Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Chmp7Q8R1T1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Chmp7Q8R1T1 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Gm15372-201ENSMUST00000120729 834 ntBASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.54■■□□□ 1.04
Chmp7Q8R1T1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Zfp264-201ENSMUST00000208656 1563 ntBASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Chmp7Q8R1T1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC21.52■■□□□ 1.04
Chmp7Q8R1T1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Gm7935-201ENSMUST00000100555 1278 ntBASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Chmp7Q8R1T1 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Gm10052-201ENSMUST00000168019 960 ntBASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Gm7729-201ENSMUST00000050143 801 ntBASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Chmp7Q8R1T1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Gm8969-201ENSMUST00000199694 526 ntBASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 AC108846.1-201ENSMUST00000214531 513 ntBASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC21.49■■□□□ 1.03
Chmp7Q8R1T1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms