Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Rpp40Q8R1F9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Gm9013-201ENSMUST00000132939 882 ntBASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Gm5587-201ENSMUST00000206270 674 ntBASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rpp40Q8R1F9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rpp40Q8R1F9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Gm11336-201ENSMUST00000118168 334 ntBASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rpp40Q8R1F9 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Gm25016-201ENSMUST00000158399 131 ntBASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.04■□□□□ 0.48
Rpp40Q8R1F9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Gm18115-201ENSMUST00000221209 621 ntBASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rpp40Q8R1F9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms