Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Vopp1Q8R1C3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Gm13884-201ENSMUST00000118103 829 ntBASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vopp1Q8R1C3 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Gm43347-201ENSMUST00000200226 580 ntBASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Gm5864-201ENSMUST00000202263 970 ntBASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vopp1Q8R1C3 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Gm10052-201ENSMUST00000168019 960 ntBASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Gm7729-201ENSMUST00000050143 801 ntBASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vopp1Q8R1C3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Gm27867-201ENSMUST00000184778 125 ntBASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Gm44771-201ENSMUST00000206975 626 ntBASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vopp1Q8R1C3 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vopp1Q8R1C3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vopp1Q8R1C3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Mzt1-203ENSMUST00000227948 952 ntBASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vopp1Q8R1C3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44357-201ENSMUST00000195897 142 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm19658-201ENSMUST00000196231 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44367-201ENSMUST00000196836 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44350-201ENSMUST00000197197 138 ntBASIC17.82■□□□□ 0.44
Vopp1Q8R1C3 Gm44390-201ENSMUST00000197533 144 ntBASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms