Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf7Q8R0S1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Atf7Q8R0S1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Atf7Q8R0S1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atf7Q8R0S1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atf7Q8R0S1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Atf7Q8R0S1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Atf7Q8R0S1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Atf7Q8R0S1 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Atf7Q8R0S1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Gm11539-201ENSMUST00000119837 557 ntBASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Gm13436-201ENSMUST00000120418 567 ntBASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Gm7370-201ENSMUST00000219471 767 ntBASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Atf7Q8R0S1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.85■□□□□ 0.77
Atf7Q8R0S1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms