Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm15920-201ENSMUST00000118998 402 ntBASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Ddx54Q8K4L0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Gm13036-201ENSMUST00000117799 748 ntBASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Ddx54Q8K4L0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Ddx54Q8K4L0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Ddx54Q8K4L0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Gm6184-201ENSMUST00000120403 1261 ntBASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Gm37584-201ENSMUST00000193595 1290 ntBASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ddx54Q8K4L0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Gm10175-201ENSMUST00000086013 645 ntBASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ddx54Q8K4L0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ddx54Q8K4L0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ddx54Q8K4L0 Zfp264-201ENSMUST00000208656 1563 ntBASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms