Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Slc47a1Q8K0H1 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Slc47a1Q8K0H1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Slc47a1Q8K0H1 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Slc47a1Q8K0H1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Slc47a1Q8K0H1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Slc47a1Q8K0H1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms