Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Mir3081-201ENSMUST00000175305 84 ntBASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Gm18669-201ENSMUST00000216049 778 ntBASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Depdc1aQ8CIG0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.98■□□□□ 0.63
Depdc1aQ8CIG0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Depdc1aQ8CIG0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Depdc1aQ8CIG0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Depdc1aQ8CIG0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Depdc1aQ8CIG0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Depdc1aQ8CIG0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms