Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.45■□□□□ 0.54
Sox30Q8CGW4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Sox30Q8CGW4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sox30Q8CGW4 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Gm7638-201ENSMUST00000121348 967 ntBASIC18.43■□□□□ 0.54
Sox30Q8CGW4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.43■□□□□ 0.54
Sox30Q8CGW4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sox30Q8CGW4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Gm37856-201ENSMUST00000191634 999 ntBASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.41■□□□□ 0.54
Sox30Q8CGW4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gm5643-201ENSMUST00000117081 966 ntBASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gm12441-201ENSMUST00000121806 588 ntBASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gm38027-201ENSMUST00000192315 235 ntBASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox30Q8CGW4 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.54
Sox30Q8CGW4 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sox30Q8CGW4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms