Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.52■□□□□ 0.39
Rp1l1Q8CGM2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Gm11780-201ENSMUST00000136880 516 ntBASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rp1l1Q8CGM2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC17.5■□□□□ 0.39
Rp1l1Q8CGM2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rp1l1Q8CGM2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rp1l1Q8CGM2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Chchd1-203ENSMUST00000224633 557 ntBASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rp1l1Q8CGM2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.46■□□□□ 0.39
Rp1l1Q8CGM2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rp1l1Q8CGM2 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Rp1l1Q8CGM2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.46■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms