Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Smc4Q8CG47 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.78■□□□□ 0.92
Smc4Q8CG47 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Smc4Q8CG47 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Smc4Q8CG47 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc4Q8CG47 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc4Q8CG47 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc4Q8CG47 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc4Q8CG47 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Ank2-226ENSMUST00000189368 339 ntBASIC20.76■□□□□ 0.91
Smc4Q8CG47 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.76■□□□□ 0.91
Smc4Q8CG47 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc4Q8CG47 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smc4Q8CG47 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc4Q8CG47 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc4Q8CG47 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.73■□□□□ 0.91
Smc4Q8CG47 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.73■□□□□ 0.91
Smc4Q8CG47 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc4Q8CG47 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms