Protein–RNA interactions for Protein: Q8CDT9

4933402N03Rik, MCG1612, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933402N03RikQ8CDT9 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.19■□□□□ 0.02
4933402N03RikQ8CDT9 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
4933402N03RikQ8CDT9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Gm13168-201ENSMUST00000121771 632 ntBASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
4933402N03RikQ8CDT9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Gm12085-201ENSMUST00000119263 940 ntBASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Gm20760-201ENSMUST00000179197 648 ntBASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
4933402N03RikQ8CDT9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
4933402N03RikQ8CDT9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 118.2 ms