Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Timm23-208ENSMUST00000226683 750 ntBASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.71■□□□□ 0.59
Ccdc38Q8CDN8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ccdc38Q8CDN8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Ccdc38Q8CDN8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ccdc38Q8CDN8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ccdc38Q8CDN8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccdc38Q8CDN8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Odf3b-204ENSMUST00000227834 930 ntBASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccdc38Q8CDN8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Gm715-201ENSMUST00000117865 831 ntBASIC18.66■□□□□ 0.58
Ccdc38Q8CDN8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms