Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Prpf31Q8CCF0 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Prpf31Q8CCF0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Gm10819-201ENSMUST00000099988 561 ntBASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Prpf31Q8CCF0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm13186-201ENSMUST00000118031 316 ntBASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm17808-201ENSMUST00000200859 894 ntBASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Prpf31Q8CCF0 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Phf7-203ENSMUST00000226565 1971 ntBASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Prpf31Q8CCF0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms