Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Gm11355-201ENSMUST00000121120 306 ntBASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Shisa4Q8CA71 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.59■□□□□ 0.73
Shisa4Q8CA71 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa4Q8CA71 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Shisa4Q8CA71 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Gm18421-201ENSMUST00000204122 625 ntBASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Gm5587-201ENSMUST00000206270 674 ntBASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Shisa4Q8CA71 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Mir770-201ENSMUST00000103252 94 ntBASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Gm17971-201ENSMUST00000190239 806 ntBASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Shisa4Q8CA71 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Shisa4Q8CA71 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa4Q8CA71 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa4Q8CA71 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Shisa4Q8CA71 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms