Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Slc46a2Q8CA03 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Gm13148-201ENSMUST00000118892 745 ntBASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Gm5408-201ENSMUST00000197998 747 ntBASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.22■□□□□ 0.19
Slc46a2Q8CA03 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Slc46a2Q8CA03 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc46a2Q8CA03 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Slc46a2Q8CA03 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Slc46a2Q8CA03 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Slc46a2Q8CA03 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.19■□□□□ 0.18
Slc46a2Q8CA03 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Slc46a2Q8CA03 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms