Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Alx1Q8C8B0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.68■□□□□ 0.74
Alx1Q8C8B0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Alx1Q8C8B0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Alx1Q8C8B0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Mir770-201ENSMUST00000103252 94 ntBASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Gm29518-201ENSMUST00000190858 372 ntBASIC19.66■□□□□ 0.74
Alx1Q8C8B0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Alx1Q8C8B0 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.65■□□□□ 0.74
Alx1Q8C8B0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Alx1Q8C8B0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Alx1Q8C8B0 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.63■□□□□ 0.73
Alx1Q8C8B0 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms